Genomes and Sequences:
Phytozome: plant genomes and sequences supported by JGI.
Physcomitrella eFP Browser: Physcomitrella transcriptomics data.
PEATmoss: an expression atlas for bryophyte gene expression data.
PHYSCObase: a database for Physcomitrella sequences and protocols.
Uniprot: protein sequences and annotations.
PDB: protein structure data bank.

Molecular Tools and Resources:
Conserved Domain Search: an NCBI tool for conserved domain search.
SMART: a simple modular architecture research tool.
InterPro: a searchable database for protein family analysis based on domain architectures and important sites.
Localization Prediction Tools 1: tools for predicting the subcellular localization of a protein.
Localization Prediction Tools 2: tools for predicting the subcellular localization of a protein.
Post-Translational Modification Prediction Tools: tools for predicting post-translational modifications of a protein.
MEGA: a tool for molecular evolutionary genetics analysis.
Jalview: a tool for sequence alignment and visualization.
iTOL: an online tool for rendering phylogenetic trees.
Fiji: a tool for image processing and analysis.
Chimera: a tool for protein structure visualization.
Addgene: a non-profit plasmid repository.
IDT Codon Optimization: a codon optimization tool (registration and log-in required).
FASTA Converter: an online tool for converting files into the fasta format and vice versa.
Chemical Calculator: an online chemical calculator.
Silent Mutator: an online tool for generating synonymous mutations to introduce restriction sites.
Galaxy: an open source, web-based platform for data intensive biomedical research.

Others:
iMOSS: the international molecular moss science society.
TAIR: the Arabidopsis information resource database.
MarpolBase: the genome database for Marchantia polymorpha.
Saccharomyces Genome Database: the genome database for the budding yeast Saccharomyces cerevisiae.
WormBase: the genome database for Caenorhabditis elegans and related nematodes.
FlyBase: the genome database for the fruit fly Drosophila melanogaster and related species.
Mouse Genome Informatics: the international database resource for the laboratory mouse.
EnsemblPlants: plant genomes and sequences supported by EMBL-EBL.
Ensembl Genomes: genomes and sequences of Metazoa, Plants, Protists, Fungi, and Bacteria supported by EMBL-EBL.